pyphi.connectivity

Functions for determining substrate connectivity properties.

Functions

apply_boundary_conditions_to_cm(...)	Remove connections to or from external nodes.
block_cm(cm)	Return whether cm can be arranged as a block connectivity matrix.
block_reducible(cm, nodes1, nodes2)	Return whether connections from nodes1 to nodes2 are reducible.
causally_significant_nodes(cm)	Return indices of nodes that have both inputs and outputs.
get_inputs_from_cm(index, cm)	Return indices of inputs to the node with the given index.
get_outputs_from_cm(index, cm)	Return indices of the outputs of node with the given index.
is_full(cm, nodes1, nodes2)	Test connectivity of one set of nodes to another.
is_strong(cm[, nodes])	Return whether the connectivity matrix is strongly connected.
is_weak(cm[, nodes])	Return whether the connectivity matrix is weakly connected.
relevant_connections(n, _from, to)	Construct a connectivity matrix.
subadjacency(cm, source[, target])	Return the sub-adjacency matrix for two groups of nodes.